Objective To analyze the relation of immune cell characteristics with neurodegenerative diseases with respect to Alzheimer's disease (AD), Parkinson's disease (PD), and multiple sclerosis (MS) by employing the Mendelian randomization (MR) method. Methods A total of 731 immune cell characteristics and data of genome⁃wide association study of AD, PD, and MS were obtained from the databases of GWAS Catalog and IEU OpenGWAS Project, respectively. A total of 731 immune cell characteristics were used as exposure factors, AD, PD and MS were used as outcomes, and single nucleotide polymorphism (SNP) related to immune cell characteristics was used as instrumental variable, after screening instrumental variable, the inverse variance weighted (IVW) method was used as the main method, and then the weighted median method, MR⁃Egger test, simple mode method, and weighted mode method were used as supplement to perform the two⁃sample MR analysis; in addition, sensitivity analysis was performed by using the MR⁃Egger intercept test, Cochran's Q test, and leave⁃one⁃out method. Results The analytic results of IVW method revealed that CD4+ CD8dim %leukocyte, CD4+ CD8dim %lymphocyte, CD4+ CD8dim AC, CD8 on CM CD8br, CD8 on naive CD8br, and CD20 on memory B cell were the risk factors for the occurrence of AD (OR>1, P<0.05), whereas B cell AC, CX3CR1 on CD14+ CD16⁃ monocyte, and Myeloid DC %DC were the protective factors for the occurrence of PD (OR<1, P<0.05), and CD11b on Mo MDSC was the risk factor for the occurrence of PD (OR>1, P<0.05); in addition, CM CD8br %T cell, CM CD8br AC, and Myeloid DC AC were the protective factors for the occurrence of MS (OR<1, P<0.05). The analytic results of the remaining four methods were consistent with those of the IVW method. The MR⁃Egger intercept test did not find horizontal pleiotropy, while the Cochran's Q test did not find heterogeneity (P>0.05). The results of leave⁃one⁃out method indicated that the causal effect between immune cell characteristics and AD, PD, and MS was not affected by any single SNP. Conclusion The elevated level of CD8+ T lymphocyte is associated with the increased morbidity risk of AD and MS, which may be the common influence path of these two diseases. Myeloid DC is a protective factor for MS while a risk factor for PD.