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论著.生物信息技术 | 更新时间:2024-10-24
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基于数据挖掘及网络药理学探讨中药治疗肺癌脑转移的用药规律及相关机制
Medication rule and relevant mechanism of Traditional Chinese Medicine for the treatment of lung cancer brain metastasis based on data mining and network pharmacology: an exploration study

广西医学 页码:1383-1393

作者机构:刘哲宁,在读硕士研究生,住院医师,研究方向为中西医结合临床、抗肿瘤药物相关不良反应的中西医结合治疗。

基金信息:中日友好医院临床研究与转化跃升项目(2022⁃NHLHCRF⁃LX⁃02)

DOI:10.11675/j.issn.0253⁃4304.2024.09.15

  • 中文简介
  • 英文简介
  • 参考文献

目的 基于数据挖掘及网络药理学探讨中药治疗肺癌脑转移的用药规律和作用机制。方法 (1)通过中国知网、万方数据知识服务平台、维普中文期刊服务平台、中国生物医学文献服务系统检索中药治疗肺癌脑转移的文献,提取文献中的处方及中药组成等信息,分析药物的使用频次和性味归经频次,并进行关联规则分析和聚类分析。(2)通过中药系统药理数据和分析平台、本草组鉴数据库、中医药百科全书数据库收集并筛选核心药对的有效活性成分,利用SwissTargetPrediction平台获取其作用靶点。在DrugBank数据库、GeneCards®数据库、DisGeNET数据库检索肺癌脑转移的疾病靶点。取两者交集后,构建蛋白⁃蛋白相互作用网络和药物⁃成分⁃靶点网络筛选核心靶点和主要活性成分,并进行富集分析,通过分子对接技术进行验证。结果 纳入46篇文献,共包含47首处方,涉及204味中药,总使用频次为853次,药性以寒性、温性、平性为主,药味以甘味、苦味、辛味为主,归经以肺经、肝经、脾经为主。关联规则分析得到10个药对,其中黄芪⁃地龙为核心药对,聚类分析得到4类药物组合。黄芪⁃地龙的主要活性成分为华良姜素、二氢辣椒素、常春藤皂苷元、肉豆蔻油酸等,主要作用于酪氨酸激酶、肿瘤抑制蛋白、细胞色素P450家族1亚家族A成员1、信号传导及转录激活蛋白(STAT3)等核心靶点,通过癌症通路、癌症中的蛋白聚糖、磷脂酰肌醇3⁃激酶/蛋白激酶 B信号通路等信号通路发挥治疗作用。分子对接显示主要活性成分与核心靶点对接良好,其中常春藤皂苷元与STAT3结合性最佳。结论 肺癌脑转移病机属本虚标实,“虚、热、痰、瘀、风”为其基本病理因素。中药治疗肺癌脑转移以扶正祛邪为主要治则,其核心药物通过多成分、多靶点、多通路发挥治疗作用。

Objective To explore the medication rule and mechanism of Traditional Chinese Medicine for the treatment of lung cancer brain metastasis based on data mining and network pharmacology. Methods (1) Literature of Traditional Chinese Medicine for the treatment of lung cancer brain metastasis was retrieved from the databases of China National Knowledge Infrastructure, Wanfang Data Knowledge Service Platform, VIP, Chinese Biomedical Literature Service System. Information such as prescriptions and Traditional Chinese Medicine compositions were extracted from the literature. The use frequency of drugs, and drug frequency of property, flavor, and meridian were analyzed. The associated rule analysis and cluster analysis were conducted. (2) Effective active components of the core drug pairs were collected and screened from Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform, HERB database, and The Encyclopedia of Traditional Chinese Medicine database, and their effect targets were obtained by using the SwissTargetPrediction platform. Disease targets of lung cancer brain metastasis were retrieved from the databases of DrugBank, GeneCards®, and DisGeNET. After obtaining the intersection of the two, protein⁃protein interaction network and drugs⁃components⁃targets network were established for screening the core targets and main active components, and then enrichment analysis was conducted, as well as molecular docking technique was employed to perform validation. Results A total of 46 literature was enrolled, containing 47 prescriptions, concerning 204 flavors of Traditional Chinese Medicines in total. The total use frequency was 853 times, and drug properties were mainly cold, warm, and moderate, drug flavors were mainly sweet, bitter and acrid, and meridians were mainly lung meridian, liver meridian, and spleen meridian. Ten drug pairs were obtained by the associated rule analysis, therein Hedysarum multijugum⁃Pheretima was the core drug pair. A total of 4 categories of drug combinations were obtained by cluster analysis. The main active components of Hedysarum multijugum⁃Pheretima were kumatakenin, dihydrocapsaicin, hederagenin, and myristoleic acid, etc., mainly acting on the core targets with respect to tyrosine kinase, tumor suppressor protein, cytochrome P450 family 1 subfamily A member 1, signal transducer and activator of transcription 3 (STAT3), etc., as well as exerting therapeutic effect through cancer pathway, proteoglycan in cancer, phosphoinositide 3⁃kinase/protein kinase B signaling pathway, etc. Molecular docking revealed that the main active components docked well with the core targets, among which hederagenin had the best binding to STAT3. Conclusion The pathogenesis of lung cancer brain metastasis belongs to deficiency in nature and excess in superficiality. Deficiency, heat, phlegm, blood stasis, and wind are the basic pathological factors. The main therapeutic principle of Traditional Chinese Medicine for the treatment of lung cancer brain metastasis is reinforcing the healthy qi to eliminate pathogenic factors, and its core drugs play a therapeutic role through multi⁃components, multi⁃targets and multi⁃pathways.

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